Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 AL080243.2-201ENST00000418783 582 ntBASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 BANF1P1-201ENST00000553684 263 ntBASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 PCDHAC2-203ENST00000615316 3011 ntBASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL22A1Q8NFW1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC22.9■■□□□ 1.26
COL22A1Q8NFW1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.89■■□□□ 1.26
COL22A1Q8NFW1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL22A1Q8NFW1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
COL22A1Q8NFW1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 MIR658-201ENST00000385210 100 ntBASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 AC104794.3-201ENST00000566840 1248 ntBASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 MIR4525-201ENST00000580000 75 ntBASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 REXO1L11P-201ENST00000620964 1927 ntBASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 SLC22A20-204ENST00000530038 1673 ntBASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
COL22A1Q8NFW1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 AC092658.1-201ENST00000505836 891 ntBASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 AC073389.1-201ENST00000595595 795 ntBASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL22A1Q8NFW1 AFG3L1P-217ENST00000557444 2447 ntBASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 AL391825.1-201ENST00000457671 1364 ntBASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 AP3S2-216ENST00000617003 1561 ntBASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 DFFBP1-201ENST00000433250 979 ntBASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.87■■□□□ 1.25
COL22A1Q8NFW1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms