Protein–RNA interactions for Protein: Q8NEM8

AGBL3, Cytosolic carboxypeptidase 3, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AGBL3Q8NEM8 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.54■□□□□ 0.88
AGBL3Q8NEM8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
AGBL3Q8NEM8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.54■□□□□ 0.88
AGBL3Q8NEM8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AGBL3Q8NEM8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.54■□□□□ 0.88
AGBL3Q8NEM8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 MIR661-201ENST00000384842 89 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC005034.1-201ENST00000426657 489 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 FAM207CP-201ENST00000443486 507 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC109635.5-201ENST00000533593 962 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 AC026150.2-201ENST00000564693 1156 ntBASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AGBL3Q8NEM8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SPDYE7P-202ENST00000420373 878 ntBASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SPDYE14P-201ENST00000442619 822 ntBASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 AP000974.1-201ENST00000623909 2387 ntBASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
AGBL3Q8NEM8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AGBL3Q8NEM8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
AGBL3Q8NEM8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.52■□□□□ 0.87
AGBL3Q8NEM8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 AC008677.1-201ENST00000519230 1561 ntBASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 FO538757.1-201ENST00000623083 1397 ntBASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 UGT1A2P-201ENST00000454886 866 ntBASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 AC012569.1-201ENST00000591191 1524 ntBASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AGBL3Q8NEM8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms