Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC111152.3-201ENST00000569699 673 ntBASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSMEM1Q8N8F7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSMEM1Q8N8F7 AL353593.2-201ENST00000602529 1483 ntBASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LSMEM1Q8N8F7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSMEM1Q8N8F7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms