Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 AL513190.1-201ENST00000621254 727 ntBASIC26.99■■□□□ 1.91
VPS8Q8N3P4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
VPS8Q8N3P4 LINC02012-201ENST00000608206 1725 ntBASIC26.98■■□□□ 1.91
VPS8Q8N3P4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 RNF165-205ENST00000588679 2904 ntBASIC26.97■■□□□ 1.91
VPS8Q8N3P4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 YBX2P1-201ENST00000394192 760 ntBASIC26.97■■□□□ 1.91
VPS8Q8N3P4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 AC096734.2-201ENST00000562054 433 ntBASIC26.97■■□□□ 1.91
VPS8Q8N3P4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 AC141586.5-201ENST00000624546 2050 ntBASIC26.97■■□□□ 1.91
VPS8Q8N3P4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
VPS8Q8N3P4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 AC002347.1-201ENST00000569543 541 ntBASIC26.96■■□□□ 1.91
VPS8Q8N3P4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 AC092865.6-201ENST00000642101 219 ntBASIC26.96■■□□□ 1.91
VPS8Q8N3P4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
VPS8Q8N3P4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
VPS8Q8N3P4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
VPS8Q8N3P4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
VPS8Q8N3P4 AC139713.2-201ENST00000641328 2723 ntBASIC26.95■■□□□ 1.91
VPS8Q8N3P4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
VPS8Q8N3P4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC26.95■■□□□ 1.91
VPS8Q8N3P4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 CXCL1P1-201ENST00000502804 216 ntBASIC26.95■■□□□ 1.9
VPS8Q8N3P4 AC124947.2-201ENST00000547118 1133 ntBASIC26.95■■□□□ 1.9
VPS8Q8N3P4 PDPK2P-202ENST00000562415 1191 ntBASIC26.95■■□□□ 1.9
VPS8Q8N3P4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
VPS8Q8N3P4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 ALG1L5P-201ENST00000482043 771 ntBASIC26.94■■□□□ 1.9
VPS8Q8N3P4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms