Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.04■□□□□ 0.48
SCML4Q8N228 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.04■□□□□ 0.48
SCML4Q8N228 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.04■□□□□ 0.48
SCML4Q8N228 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.04■□□□□ 0.48
SCML4Q8N228 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.04■□□□□ 0.48
SCML4Q8N228 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.04■□□□□ 0.48
SCML4Q8N228 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.04■□□□□ 0.48
SCML4Q8N228 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.04■□□□□ 0.48
SCML4Q8N228 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCML4Q8N228 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SCML4Q8N228 CROCCP2-202ENST00000412962 2773 ntBASIC18.04■□□□□ 0.48
SCML4Q8N228 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCML4Q8N228 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SCML4Q8N228 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.03■□□□□ 0.48
SCML4Q8N228 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SCML4Q8N228 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.03■□□□□ 0.48
SCML4Q8N228 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 AL590627.1-203ENST00000421194 1026 ntBASIC18.03■□□□□ 0.48
SCML4Q8N228 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.03■□□□□ 0.48
SCML4Q8N228 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 GGTLC5P-201ENST00000617623 998 ntBASIC18.03■□□□□ 0.48
SCML4Q8N228 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.03■□□□□ 0.48
SCML4Q8N228 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.03■□□□□ 0.48
SCML4Q8N228 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCML4Q8N228 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.02■□□□□ 0.48
SCML4Q8N228 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SCML4Q8N228 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SCML4Q8N228 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SCML4Q8N228 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SCML4Q8N228 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.02■□□□□ 0.48
SCML4Q8N228 AC079776.4-201ENST00000511039 504 ntBASIC18.02■□□□□ 0.48
SCML4Q8N228 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.02■□□□□ 0.48
SCML4Q8N228 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.02■□□□□ 0.48
SCML4Q8N228 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.02■□□□□ 0.48
SCML4Q8N228 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
SCML4Q8N228 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCML4Q8N228 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SCML4Q8N228 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
SCML4Q8N228 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.02■□□□□ 0.47
SCML4Q8N228 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
SCML4Q8N228 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
SCML4Q8N228 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.01■□□□□ 0.47
SCML4Q8N228 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 RNA5SP415-201ENST00000517246 115 ntBASIC18.01■□□□□ 0.47
SCML4Q8N228 UNC93B6-202ENST00000528242 690 ntBASIC18.01■□□□□ 0.47
SCML4Q8N228 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SCML4Q8N228 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SCML4Q8N228 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCML4Q8N228 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18■□□□□ 0.47
SCML4Q8N228 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18■□□□□ 0.47
SCML4Q8N228 PP12613-201ENST00000424958 2230 ntBASIC18■□□□□ 0.47
SCML4Q8N228 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms