Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 AC079776.1-201ENST00000401540 1152 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 HCG4-201ENST00000418983 998 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 AC027369.6-201ENST00000525520 931 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 HILS1-202ENST00000545329 423 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 AC004790.1-201ENST00000612686 536 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 AL353732.1-201ENST00000569618 1459 ntBASIC24.42■■□□□ 1.5
UBR1Q8IWV7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UBR1Q8IWV7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 REXO1L9P-201ENST00000604264 2108 ntBASIC24.41■■□□□ 1.5
UBR1Q8IWV7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.41■■□□□ 1.5
UBR1Q8IWV7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 AC140912.1-201ENST00000577171 1054 ntBASIC24.4■■□□□ 1.5
UBR1Q8IWV7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
UBR1Q8IWV7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 AL844908.2-201ENST00000609461 460 ntBASIC24.39■■□□□ 1.5
UBR1Q8IWV7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
UBR1Q8IWV7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
UBR1Q8IWV7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
UBR1Q8IWV7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 HNRNPA3P5-201ENST00000455201 833 ntBASIC24.38■■□□□ 1.49
UBR1Q8IWV7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AL606495.2-201ENST00000605867 535 ntBASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AC004233.3-201ENST00000607794 1269 ntBASIC24.38■■□□□ 1.49
UBR1Q8IWV7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 HLA-DQB1-201ENST00000374943 1656 ntBASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 PGF-202ENST00000405431 666 ntTSL 5 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 MNT-208ENST00000575394 606 ntTSL 4 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC24.38■■□□□ 1.49
UBR1Q8IWV7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 LINC00304-203ENST00000565008 1864 ntBASIC24.37■■□□□ 1.49
UBR1Q8IWV7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms