Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.54■□□□□ 0.56
NPAS4Q8IUM7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AL671277.1-201ENST00000429656 993 ntBASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AC107918.2-201ENST00000530817 355 ntBASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 AC009093.7-201ENST00000623853 1223 ntBASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS4Q8IUM7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 FAM86GP-201ENST00000448322 971 ntBASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 AC093520.2-201ENST00000561830 333 ntBASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.52■□□□□ 0.56
NPAS4Q8IUM7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS4Q8IUM7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS4Q8IUM7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.52■□□□□ 0.55
NPAS4Q8IUM7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 SPDYE11-202ENST00000450699 704 ntBASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 KRT8P48-201ENST00000515599 1220 ntBASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
NPAS4Q8IUM7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms