Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 AC093677.2-201ENST00000600169 1863 ntBASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA11Q86Y39 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 AC106820.2-201ENST00000563775 3264 ntBASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 MRPL20P1-201ENST00000400819 433 ntBASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 AP006288.1-201ENST00000446065 395 ntBASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 AC010654.1-201ENST00000615722 808 ntBASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 AC009336.1-201ENST00000608941 1553 ntBASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.49□□□□□ -0.25
NDUFA11Q86Y39 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 GPR89P-201ENST00000407924 1495 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AC068880.1-201ENST00000507289 2297 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AC012313.1-201ENST00000593393 3059 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 KRT18P2-201ENST00000447938 1258 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 HCG4B-203ENST00000450128 991 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 AC004790.2-201ENST00000623588 572 ntBASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NDUFA11Q86Y39 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms