Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF546Q86UE3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC098934.4-201ENST00000564127 592 ntBASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC131212.4-201ENST00000623606 975 ntBASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.52□□□□□ -0.09
ZNF546Q86UE3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC116407.2-201ENST00000613639 860 ntBASIC14.51□□□□□ -0.09
ZNF546Q86UE3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AL445675.2-201ENST00000620291 557 ntBASIC14.51□□□□□ -0.09
ZNF546Q86UE3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 AC126755.1-201ENST00000525846 6405 ntBASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF546Q86UE3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AL365203.3-201ENST00000609742 2057 ntBASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC069152.1-201ENST00000438030 544 ntBASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms