Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 KRT18P28-201ENST00000453838 1332 ntBASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAI1Q7Z5J4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AL139400.1-201ENST00000366220 510 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AC096734.2-201ENST00000562054 433 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 LINC00982-205ENST00000420957 435 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AC023141.5-201ENST00000458585 616 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AP002472.1-201ENST00000577490 586 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 AC022145.2-201ENST00000598203 171 ntBASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI1Q7Z5J4 BCAR1-209ENST00000546196 1340 ntBASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 SNHG9-202ENST00000564014 471 ntBASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 AC023141.13-201ENST00000604991 943 ntBASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI1Q7Z5J4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 PTCHD3P3-201ENST00000403073 906 ntBASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 AC004461.1-201ENST00000412461 403 ntBASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI1Q7Z5J4 AC099522.2-201ENST00000607001 744 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms