Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CYS1Q717R9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CYS1Q717R9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYS1Q717R9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CYS1Q717R9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CYS1Q717R9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CYS1Q717R9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CYS1Q717R9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CYS1Q717R9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.35■□□□□ 0.37
CYS1Q717R9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CYS1Q717R9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CYS1Q717R9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CYS1Q717R9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.34■□□□□ 0.37
CYS1Q717R9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CYS1Q717R9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.34■□□□□ 0.37
CYS1Q717R9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.34■□□□□ 0.37
CYS1Q717R9 AC132938.5-201ENST00000624980 1813 ntBASIC17.34■□□□□ 0.37
CYS1Q717R9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CYS1Q717R9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
CYS1Q717R9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.33■□□□□ 0.37
CYS1Q717R9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.33■□□□□ 0.37
CYS1Q717R9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
CYS1Q717R9 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.33■□□□□ 0.37
CYS1Q717R9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CYS1Q717R9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CYS1Q717R9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.33■□□□□ 0.36
CYS1Q717R9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.33■□□□□ 0.36
CYS1Q717R9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.33■□□□□ 0.36
CYS1Q717R9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.33■□□□□ 0.36
CYS1Q717R9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CYS1Q717R9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.33■□□□□ 0.36
CYS1Q717R9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CYS1Q717R9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.32■□□□□ 0.36
CYS1Q717R9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CYS1Q717R9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.32■□□□□ 0.36
CYS1Q717R9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CYS1Q717R9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 OR6D1P-202ENST00000641007 5290 ntBASIC17.32■□□□□ 0.36
CYS1Q717R9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.32■□□□□ 0.36
CYS1Q717R9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.32■□□□□ 0.36
CYS1Q717R9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYS1Q717R9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.32■□□□□ 0.36
CYS1Q717R9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.32■□□□□ 0.36
CYS1Q717R9 AP002490.2-201ENST00000524791 560 ntBASIC17.32■□□□□ 0.36
CYS1Q717R9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.32■□□□□ 0.36
CYS1Q717R9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.32■□□□□ 0.36
CYS1Q717R9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms