Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 AL023973.1-201ENST00000624619 620 ntBASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 AC066615.1-201ENST00000640911 628 ntBASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 DOC2GP-204ENST00000639052 2548 ntBASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PTCHD4Q6ZW05 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 SLC25A3P1-201ENST00000443844 931 ntBASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 LYSMD4-203ENST00000378904 2122 ntBASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 AC005915.1-201ENST00000624912 2018 ntBASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCHD4Q6ZW05 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCHD4Q6ZW05 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms