Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 FAM197Y3-203ENST00000618346 717 ntBASIC15.73■□□□□ 0.11
RTL6Q6ICC9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.73■□□□□ 0.11
RTL6Q6ICC9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTL6Q6ICC9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AL353593.2-201ENST00000602529 1483 ntBASIC15.72■□□□□ 0.11
RTL6Q6ICC9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AL049757.1-201ENST00000616842 1596 ntBASIC15.72■□□□□ 0.11
RTL6Q6ICC9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 KRT18P27-201ENST00000427733 1299 ntBASIC15.72■□□□□ 0.11
RTL6Q6ICC9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RTL6Q6ICC9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 AC067852.2-201ENST00000590513 2313 ntBASIC15.71■□□□□ 0.11
RTL6Q6ICC9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 AC073621.1-201ENST00000392730 636 ntBASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTL6Q6ICC9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 AC100803.2-201ENST00000562459 1963 ntBASIC15.71■□□□□ 0.1
RTL6Q6ICC9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTL6Q6ICC9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTL6Q6ICC9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms