Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 TNRC18P3-201ENST00000441896 2691 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 MYCLP1-201ENST00000372451 1075 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 TSPY5P-201ENST00000426936 936 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AC112907.2-201ENST00000448639 330 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AC097493.4-201ENST00000641197 219 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AL118508.1-201ENST00000613502 2345 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 AC010460.3-201ENST00000511359 1579 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 Z83836.1-201ENST00000624605 1642 ntBASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATP6AP1LQ52LC2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 KRT18P38-201ENST00000449496 1282 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 VENTXP5-201ENST00000523979 775 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 AC012306.2-201ENST00000609350 630 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 LINC02012-201ENST00000608206 1725 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 AC093525.9-201ENST00000624961 1746 ntBASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ATP6AP1LQ52LC2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP6AP1LQ52LC2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ATP6AP1LQ52LC2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
ATP6AP1LQ52LC2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
ATP6AP1LQ52LC2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATP6AP1LQ52LC2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6AP1LQ52LC2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6AP1LQ52LC2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6AP1LQ52LC2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6AP1LQ52LC2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP6AP1LQ52LC2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms