Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 NCF1C-201ENST00000438382 1427 ntBASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 AL499627.1-201ENST00000569373 2188 ntBASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CTC1Q2NKJ3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 KRT19P2-202ENST00000557173 1012 ntBASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AC093512.1-201ENST00000617969 520 ntBASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AL513210.1-201ENST00000629608 234 ntBASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.58■□□□□ 0.56
CTC1Q2NKJ3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 COX5BP2-201ENST00000392354 334 ntBASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 RHOQP3-201ENST00000437982 621 ntBASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 HLA-J-203ENST00000494367 1087 ntBASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 AC010507.1-201ENST00000633895 436 ntBASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 AL353593.2-201ENST00000602529 1483 ntBASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTC1Q2NKJ3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms