Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC3A1Q07837 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC3A1Q07837 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC3A1Q07837 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC3A1Q07837 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC3A1Q07837 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC3A1Q07837 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC3A1Q07837 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC3A1Q07837 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC3A1Q07837 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC3A1Q07837 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SLC3A1Q07837 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 PCDHB19P-201ENST00000570871 2371 ntBASIC15.7■□□□□ 0.1
SLC3A1Q07837 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 GCSHP2-201ENST00000560971 527 ntBASIC15.7■□□□□ 0.1
SLC3A1Q07837 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC3A1Q07837 AGGF1P2-201ENST00000426656 2106 ntBASIC15.7■□□□□ 0.1
SLC3A1Q07837 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC3A1Q07837 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC3A1Q07837 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC3A1Q07837 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC3A1Q07837 LINC00167-201ENST00000530583 1419 ntBASIC15.68■□□□□ 0.1
SLC3A1Q07837 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SLC3A1Q07837 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SLC3A1Q07837 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms