Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 KRT18P48-201ENST00000434763 852 ntBASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AC068587.6-202ENST00000641839 5619 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 FAM8A6P-201ENST00000407496 1135 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AC113347.1-201ENST00000413321 391 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AC113404.2-201ENST00000507884 177 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AL441883.1-201ENST00000566170 1045 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AC073912.3-201ENST00000624414 853 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 AL391807.1-203ENST00000604392 2365 ntBASIC13.37□□□□□ -0.27
HIST1H1AQ02539 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HIST1H1AQ02539 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.36□□□□□ -0.27
HIST1H1AQ02539 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST1H1AQ02539 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms