Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.83■□□□□ 0.6
TFAMQ00059 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.83■□□□□ 0.6
TFAMQ00059 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TFAMQ00059 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TFAMQ00059 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.82■□□□□ 0.6
TFAMQ00059 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.82■□□□□ 0.6
TFAMQ00059 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.82■□□□□ 0.6
TFAMQ00059 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.82■□□□□ 0.6
TFAMQ00059 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.82■□□□□ 0.6
TFAMQ00059 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFAMQ00059 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TFAMQ00059 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TFAMQ00059 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.81■□□□□ 0.6
TFAMQ00059 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.81■□□□□ 0.6
TFAMQ00059 OR7E14P-202ENST00000530490 1290 ntBASIC18.81■□□□□ 0.6
TFAMQ00059 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.81■□□□□ 0.6
TFAMQ00059 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.81■□□□□ 0.6
TFAMQ00059 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TFAMQ00059 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.81■□□□□ 0.6
TFAMQ00059 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TFAMQ00059 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.81■□□□□ 0.6
TFAMQ00059 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 PCDHB18P-201ENST00000524813 2368 ntBASIC18.81■□□□□ 0.6
TFAMQ00059 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TFAMQ00059 AC097637.2-201ENST00000624096 1997 ntBASIC18.81■□□□□ 0.6
TFAMQ00059 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFAMQ00059 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFAMQ00059 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TFAMQ00059 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFAMQ00059 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TFAMQ00059 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.8■□□□□ 0.6
TFAMQ00059 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TFAMQ00059 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFAMQ00059 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.8■□□□□ 0.6
TFAMQ00059 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFAMQ00059 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.8■□□□□ 0.6
TFAMQ00059 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.8■□□□□ 0.6
TFAMQ00059 AL031284.1-201ENST00000419297 478 ntBASIC18.8■□□□□ 0.6
TFAMQ00059 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.8■□□□□ 0.6
TFAMQ00059 AC079776.4-201ENST00000511039 504 ntBASIC18.8■□□□□ 0.6
TFAMQ00059 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.8■□□□□ 0.6
TFAMQ00059 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TFAMQ00059 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.8■□□□□ 0.6
TFAMQ00059 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.8■□□□□ 0.6
TFAMQ00059 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.8■□□□□ 0.6
TFAMQ00059 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms