Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.51■□□□□ 0.23
RAE1P78406 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.51■□□□□ 0.23
RAE1P78406 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
RAE1P78406 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.51■□□□□ 0.23
RAE1P78406 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 AC104819.1-201ENST00000504587 486 ntBASIC16.51■□□□□ 0.23
RAE1P78406 AC012615.1-201ENST00000565797 1299 ntBASIC16.51■□□□□ 0.23
RAE1P78406 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.51■□□□□ 0.23
RAE1P78406 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 AC010331.1-201ENST00000611423 582 ntBASIC16.51■□□□□ 0.23
RAE1P78406 AP000867.4-201ENST00000641616 219 ntBASIC16.51■□□□□ 0.23
RAE1P78406 AC005915.1-201ENST00000624912 2018 ntBASIC16.51■□□□□ 0.23
RAE1P78406 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 EGFEM1P-202ENST00000431685 1563 ntBASIC16.51■□□□□ 0.23
RAE1P78406 AGGF1P2-201ENST00000426656 2106 ntBASIC16.51■□□□□ 0.23
RAE1P78406 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 AC084018.2-201ENST00000613093 2607 ntBASIC16.5■□□□□ 0.23
RAE1P78406 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RAE1P78406 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 AC148477.5-201ENST00000625164 1645 ntBASIC16.5■□□□□ 0.23
RAE1P78406 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAE1P78406 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.5■□□□□ 0.23
RAE1P78406 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RAE1P78406 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 POM121L3P-201ENST00000419331 1163 ntBASIC16.5■□□□□ 0.23
RAE1P78406 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.5■□□□□ 0.23
RAE1P78406 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAE1P78406 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 AC105020.1-201ENST00000435356 2205 ntBASIC16.5■□□□□ 0.23
RAE1P78406 BCL2-203ENST00000589955 5011 ntBASIC16.5■□□□□ 0.23
RAE1P78406 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAE1P78406 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.5■□□□□ 0.23
RAE1P78406 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAE1P78406 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAE1P78406 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAE1P78406 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAE1P78406 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RAE1P78406 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RAE1P78406 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.49■□□□□ 0.23
RAE1P78406 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.49■□□□□ 0.23
RAE1P78406 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.49■□□□□ 0.23
RAE1P78406 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.49■□□□□ 0.23
RAE1P78406 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.49■□□□□ 0.23
RAE1P78406 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.49■□□□□ 0.23
RAE1P78406 AC099336.1-202ENST00000602961 463 ntBASIC16.49■□□□□ 0.23
RAE1P78406 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAE1P78406 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAE1P78406 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms