Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.58■□□□□ 0.41
PRAMEP78395 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEP78395 AC084018.2-201ENST00000613093 2607 ntBASIC17.58■□□□□ 0.41
PRAMEP78395 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.58■□□□□ 0.41
PRAMEP78395 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.58■□□□□ 0.41
PRAMEP78395 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEP78395 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRAMEP78395 AC124067.4-201ENST00000519691 2379 ntBASIC17.58■□□□□ 0.41
PRAMEP78395 AC233702.3-201ENST00000578656 1387 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEP78395 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.58■□□□□ 0.4
PRAMEP78395 DRAXINP1-201ENST00000437611 948 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 AC091607.1-201ENST00000490318 1060 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 AC122714.2-201ENST00000502787 707 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEP78395 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.58■□□□□ 0.4
PRAMEP78395 AC109462.3-201ENST00000573934 613 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 AP002414.4-201ENST00000589764 1148 ntBASIC17.58■□□□□ 0.4
PRAMEP78395 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.58■□□□□ 0.4
PRAMEP78395 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PRAMEP78395 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEP78395 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PRAMEP78395 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEP78395 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEP78395 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEP78395 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
PRAMEP78395 AC103564.2-201ENST00000432853 1299 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.57■□□□□ 0.4
PRAMEP78395 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 TPSP2-201ENST00000561760 610 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PRAMEP78395 AC111152.3-201ENST00000569699 673 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.57■□□□□ 0.4
PRAMEP78395 AL445228.2-201ENST00000605589 952 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 AC069148.1-201ENST00000608741 768 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 AC091076.1-201ENST00000610741 619 ntBASIC17.57■□□□□ 0.4
PRAMEP78395 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PRAMEP78395 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEP78395 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.57■□□□□ 0.4
PRAMEP78395 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEP78395 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEP78395 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PRAMEP78395 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms