Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 FAM86C2P-203ENST00000528684 1004 ntBASIC20.56■□□□□ 0.88
CNTNAP1P78357 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 AL135999.2-201ENST00000622438 1686 ntBASIC20.55■□□□□ 0.88
CNTNAP1P78357 AC098818.2-201ENST00000564925 2320 ntBASIC20.55■□□□□ 0.88
CNTNAP1P78357 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 AC002056.1-201ENST00000395613 760 ntBASIC20.55■□□□□ 0.88
CNTNAP1P78357 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 FAM185BP-201ENST00000443595 716 ntBASIC20.55■□□□□ 0.88
CNTNAP1P78357 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 HILS1-202ENST00000545329 423 ntBASIC20.55■□□□□ 0.88
CNTNAP1P78357 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.55■□□□□ 0.88
CNTNAP1P78357 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNTNAP1P78357 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 AL138781.2-201ENST00000617896 1843 ntBASIC20.54■□□□□ 0.88
CNTNAP1P78357 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 SLC25A6P2-201ENST00000497974 877 ntBASIC20.54■□□□□ 0.88
CNTNAP1P78357 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 AC099522.2-201ENST00000607001 744 ntBASIC20.54■□□□□ 0.88
CNTNAP1P78357 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP1P78357 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CNTNAP1P78357 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 AC010336.2-201ENST00000564226 506 ntBASIC20.53■□□□□ 0.88
CNTNAP1P78357 AL132655.2-201ENST00000596276 594 ntBASIC20.53■□□□□ 0.88
CNTNAP1P78357 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP1P78357 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP1P78357 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP1P78357 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP1P78357 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP1P78357 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP1P78357 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.52■□□□□ 0.88
CNTNAP1P78357 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.52■□□□□ 0.88
CNTNAP1P78357 BX323043.1-201ENST00000641006 1765 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms