Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RBPMS2P1-201ENST00000437762 623 ntBASIC19.05■□□□□ 0.64
ACLYP53396 TSPY16P-201ENST00000449843 468 ntBASIC19.05■□□□□ 0.64
ACLYP53396 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.05■□□□□ 0.64
ACLYP53396 TERF1P3-201ENST00000505638 1227 ntBASIC19.05■□□□□ 0.64
ACLYP53396 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 AC087641.1-201ENST00000557561 1021 ntBASIC19.05■□□□□ 0.64
ACLYP53396 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.05■□□□□ 0.64
ACLYP53396 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.05■□□□□ 0.64
ACLYP53396 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 RN7SL204P-201ENST00000582831 262 ntBASIC19.05■□□□□ 0.64
ACLYP53396 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.05■□□□□ 0.64
ACLYP53396 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.05■□□□□ 0.64
ACLYP53396 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ACLYP53396 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 AC063926.2-201ENST00000623766 1308 ntBASIC19.04■□□□□ 0.64
ACLYP53396 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 REXO1L11P-201ENST00000620964 1927 ntBASIC19.04■□□□□ 0.64
ACLYP53396 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 MIR661-201ENST00000384842 89 ntBASIC19.04■□□□□ 0.64
ACLYP53396 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 AC107890.1-201ENST00000422478 521 ntBASIC19.04■□□□□ 0.64
ACLYP53396 SPCS2P4-201ENST00000436160 681 ntBASIC19.04■□□□□ 0.64
ACLYP53396 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.04■□□□□ 0.64
ACLYP53396 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.04■□□□□ 0.64
ACLYP53396 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
ACLYP53396 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ACLYP53396 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.03■□□□□ 0.64
ACLYP53396 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.03■□□□□ 0.64
ACLYP53396 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 AC125807.1-201ENST00000483097 614 ntBASIC19.03■□□□□ 0.64
ACLYP53396 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.03■□□□□ 0.64
ACLYP53396 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.03■□□□□ 0.64
ACLYP53396 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.03■□□□□ 0.64
ACLYP53396 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.03■□□□□ 0.64
ACLYP53396 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ACLYP53396 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.03■□□□□ 0.64
ACLYP53396 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACLYP53396 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
ACLYP53396 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACLYP53396 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ACLYP53396 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACLYP53396 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ACLYP53396 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms