Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 AC104109.2-201ENST00000602919 1418 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 AC097637.2-201ENST00000624096 1997 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 RPS2P28-201ENST00000314255 741 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFNA3P52797 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 UNC93B6-202ENST00000528242 690 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.3■□□□□ 0.2
EFNA3P52797 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNA3P52797 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 AL356488.2-201ENST00000602755 427 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 AL139327.4-201ENST00000612362 153 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
EFNA3P52797 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 LINC01451-201ENST00000623792 534 ntBASIC16.3■□□□□ 0.2
EFNA3P52797 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
EFNA3P52797 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EFNA3P52797 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNA3P52797 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EFNA3P52797 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
EFNA3P52797 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNA3P52797 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNA3P52797 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNA3P52797 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.29■□□□□ 0.2
EFNA3P52797 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.29■□□□□ 0.2
EFNA3P52797 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 AL135999.2-201ENST00000622438 1686 ntBASIC16.29■□□□□ 0.2
EFNA3P52797 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
EFNA3P52797 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
EFNA3P52797 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
EFNA3P52797 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EFNA3P52797 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNA3P52797 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNA3P52797 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 AC133963.1-201ENST00000504166 1679 ntBASIC16.28■□□□□ 0.2
EFNA3P52797 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
EFNA3P52797 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 MYCLP1-201ENST00000372451 1075 ntBASIC16.28■□□□□ 0.2
EFNA3P52797 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.28■□□□□ 0.2
EFNA3P52797 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.28■□□□□ 0.2
EFNA3P52797 LINC00982-205ENST00000420957 435 ntBASIC16.28■□□□□ 0.2
EFNA3P52797 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 AC009947.1-201ENST00000444350 727 ntBASIC16.28■□□□□ 0.2
EFNA3P52797 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EFNA3P52797 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.28■□□□□ 0.2
EFNA3P52797 AL139424.1-201ENST00000607572 797 ntBASIC16.28■□□□□ 0.2
EFNA3P52797 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EFNA3P52797 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms