Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.64■□□□□ 0.74
USP11P51784 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP11P51784 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP11P51784 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.64■□□□□ 0.73
USP11P51784 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP11P51784 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.64■□□□□ 0.73
USP11P51784 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
USP11P51784 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
USP11P51784 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 MIR7706-201ENST00000613747 67 ntBASIC19.64■□□□□ 0.73
USP11P51784 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 GPR89P-201ENST00000407924 1495 ntBASIC19.64■□□□□ 0.73
USP11P51784 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
USP11P51784 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 CROCCP2-202ENST00000412962 2773 ntBASIC19.64■□□□□ 0.73
USP11P51784 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP11P51784 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP11P51784 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 PP12613-201ENST00000424958 2230 ntBASIC19.63■□□□□ 0.73
USP11P51784 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 AL590787.1-201ENST00000568856 1315 ntBASIC19.63■□□□□ 0.73
USP11P51784 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.63■□□□□ 0.73
USP11P51784 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 AC116407.3-201ENST00000623905 1129 ntBASIC19.63■□□□□ 0.73
USP11P51784 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP11P51784 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP11P51784 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 AC006504.4-201ENST00000592118 1568 ntBASIC19.62■□□□□ 0.73
USP11P51784 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.62■□□□□ 0.73
USP11P51784 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
USP11P51784 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.62■□□□□ 0.73
USP11P51784 PGM5P2-202ENST00000637225 1043 ntBASIC19.62■□□□□ 0.73
USP11P51784 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP11P51784 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.62■□□□□ 0.73
USP11P51784 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.62■□□□□ 0.73
USP11P51784 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.61■□□□□ 0.73
USP11P51784 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP11P51784 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP11P51784 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
USP11P51784 SLC25A1P3-201ENST00000395415 828 ntBASIC19.61■□□□□ 0.73
USP11P51784 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.61■□□□□ 0.73
USP11P51784 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms