Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC30.75■■■□□ 2.51
SMARCA4P51532 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SMARCA4P51532 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
SMARCA4P51532 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC30.74■■■□□ 2.51
SMARCA4P51532 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC30.74■■■□□ 2.51
SMARCA4P51532 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SMARCA4P51532 PIN1P1-201ENST00000412108 996 ntBASIC30.74■■■□□ 2.51
SMARCA4P51532 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC30.74■■■□□ 2.51
SMARCA4P51532 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
SMARCA4P51532 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC30.74■■■□□ 2.51
SMARCA4P51532 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 FOXO1B-201ENST00000504678 1527 ntBASIC30.74■■■□□ 2.51
SMARCA4P51532 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMARCA4P51532 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC30.74■■■□□ 2.51
SMARCA4P51532 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
SMARCA4P51532 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SMARCA4P51532 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC30.74■■■□□ 2.51
SMARCA4P51532 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 AC009477.1-201ENST00000452936 217 ntBASIC30.73■■■□□ 2.51
SMARCA4P51532 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 AC010336.2-201ENST00000564226 506 ntBASIC30.73■■■□□ 2.51
SMARCA4P51532 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 MIR4453-201ENST00000584019 89 ntBASIC30.73■■■□□ 2.51
SMARCA4P51532 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SMARCA4P51532 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC30.73■■■□□ 2.51
SMARCA4P51532 NME2P1-201ENST00000426182 414 ntBASIC30.73■■■□□ 2.51
SMARCA4P51532 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC30.73■■■□□ 2.51
SMARCA4P51532 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SMARCA4P51532 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
SMARCA4P51532 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC30.72■■■□□ 2.51
SMARCA4P51532 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SMARCA4P51532 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCA4P51532 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC30.72■■■□□ 2.51
SMARCA4P51532 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC30.72■■■□□ 2.51
SMARCA4P51532 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCA4P51532 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCA4P51532 AC007967.4-201ENST00000614700 386 ntBASIC30.72■■■□□ 2.51
SMARCA4P51532 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMARCA4P51532 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC30.71■■■□□ 2.51
SMARCA4P51532 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCA4P51532 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC30.71■■■□□ 2.51
SMARCA4P51532 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC30.71■■■□□ 2.51
SMARCA4P51532 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCA4P51532 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC30.71■■■□□ 2.51
SMARCA4P51532 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC30.71■■■□□ 2.51
SMARCA4P51532 AL138828.2-201ENST00000615812 383 ntBASIC30.71■■■□□ 2.51
SMARCA4P51532 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC30.71■■■□□ 2.51
SMARCA4P51532 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCA4P51532 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC30.71■■■□□ 2.51
SMARCA4P51532 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMARCA4P51532 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SMARCA4P51532 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMARCA4P51532 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC30.7■■■□□ 2.51
SMARCA4P51532 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SMARCA4P51532 LY6E-204ENST00000519546 971 ntTSL 2 BASIC30.7■■■□□ 2.51
SMARCA4P51532 MIR6752-201ENST00000618442 71 ntBASIC30.7■■■□□ 2.51
SMARCA4P51532 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC30.7■■■□□ 2.51
SMARCA4P51532 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
SMARCA4P51532 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMARCA4P51532 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
SMARCA4P51532 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC30.7■■■□□ 2.5
SMARCA4P51532 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SMARCA4P51532 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC30.7■■■□□ 2.5
SMARCA4P51532 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.5
SMARCA4P51532 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC30.7■■■□□ 2.5
SMARCA4P51532 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
SMARCA4P51532 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA4P51532 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC30.69■■■□□ 2.5
SMARCA4P51532 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC30.69■■■□□ 2.5
SMARCA4P51532 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC30.69■■■□□ 2.5
SMARCA4P51532 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC30.69■■■□□ 2.5
SMARCA4P51532 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA4P51532 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC30.69■■■□□ 2.5
SMARCA4P51532 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA4P51532 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC30.69■■■□□ 2.5
SMARCA4P51532 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC30.69■■■□□ 2.5
SMARCA4P51532 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA4P51532 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC30.69■■■□□ 2.5
SMARCA4P51532 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC30.69■■■□□ 2.5
SMARCA4P51532 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC30.69■■■□□ 2.5
SMARCA4P51532 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC30.69■■■□□ 2.5
SMARCA4P51532 NKG7-205ENST00000600427 520 ntTSL 3 BASIC30.69■■■□□ 2.5
SMARCA4P51532 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMARCA4P51532 USP49-202ENST00000373010 2446 ntTSL 5 BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms