Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRIM2P49643 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRIM2P49643 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRIM2P49643 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRIM2P49643 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PRIM2P49643 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 SPDYE13P-201ENST00000445314 798 ntBASIC16.61■□□□□ 0.25
PRIM2P49643 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
PRIM2P49643 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRIM2P49643 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRIM2P49643 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRIM2P49643 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PRIM2P49643 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 BX276092.7-203ENST00000637198 1536 ntBASIC16.6■□□□□ 0.25
PRIM2P49643 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
PRIM2P49643 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PRIM2P49643 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.6■□□□□ 0.25
PRIM2P49643 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRIM2P49643 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRIM2P49643 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 GUSBP12-201ENST00000513727 720 ntBASIC16.6■□□□□ 0.25
PRIM2P49643 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.6■□□□□ 0.25
PRIM2P49643 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRIM2P49643 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRIM2P49643 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PRIM2P49643 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.59■□□□□ 0.25
PRIM2P49643 AC022211.2-201ENST00000585075 2527 ntBASIC16.59■□□□□ 0.25
PRIM2P49643 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PRIM2P49643 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.59■□□□□ 0.25
PRIM2P49643 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 AL136038.3-201ENST00000561909 1096 ntBASIC16.59■□□□□ 0.25
PRIM2P49643 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.59■□□□□ 0.25
PRIM2P49643 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.59■□□□□ 0.25
PRIM2P49643 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.59■□□□□ 0.25
PRIM2P49643 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRIM2P49643 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms