Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CDC34P49427 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.79□□□□□ -0.2
CDC34P49427 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.79□□□□□ -0.2
CDC34P49427 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 LINC01311-201ENST00000565162 1445 ntBASIC13.79□□□□□ -0.2
CDC34P49427 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.79□□□□□ -0.2
CDC34P49427 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDC34P49427 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDC34P49427 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 LINC02012-201ENST00000608206 1725 ntBASIC13.78□□□□□ -0.2
CDC34P49427 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDC34P49427 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC34P49427 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.78□□□□□ -0.2
CDC34P49427 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC34P49427 WWOX-216ENST00000569818 525 ntBASIC13.78□□□□□ -0.2
CDC34P49427 AF186192.3-201ENST00000583427 947 ntBASIC13.78□□□□□ -0.2
CDC34P49427 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 AC010240.3-201ENST00000607688 395 ntBASIC13.78□□□□□ -0.2
CDC34P49427 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.78□□□□□ -0.2
CDC34P49427 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC34P49427 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC34P49427 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CDC34P49427 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms