Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 AC136632.2-201ENST00000512891 861 ntBASIC18.36■□□□□ 0.53
GRIK1P39086 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.36■□□□□ 0.53
GRIK1P39086 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GRIK1P39086 PGM5P2-202ENST00000637225 1043 ntBASIC18.36■□□□□ 0.53
GRIK1P39086 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GRIK1P39086 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GRIK1P39086 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 AC006504.4-201ENST00000592118 1568 ntBASIC18.35■□□□□ 0.53
GRIK1P39086 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GRIK1P39086 MIR940-201ENST00000401276 94 ntBASIC18.35■□□□□ 0.53
GRIK1P39086 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.35■□□□□ 0.53
GRIK1P39086 UNC93B6-202ENST00000528242 690 ntBASIC18.35■□□□□ 0.53
GRIK1P39086 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.35■□□□□ 0.53
GRIK1P39086 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GRIK1P39086 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GRIK1P39086 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GRIK1P39086 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
GRIK1P39086 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.35■□□□□ 0.53
GRIK1P39086 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 LINC00982-205ENST00000420957 435 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 PMS2P1-201ENST00000431037 1228 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.34■□□□□ 0.53
GRIK1P39086 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.34■□□□□ 0.53
GRIK1P39086 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.34■□□□□ 0.53
GRIK1P39086 AC145285.3-201ENST00000564603 959 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 AL671883.3-201ENST00000603274 991 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 AL139424.1-201ENST00000607572 797 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 Z83851.2-201ENST00000609564 659 ntBASIC18.34■□□□□ 0.53
GRIK1P39086 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GRIK1P39086 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.34■□□□□ 0.53
GRIK1P39086 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GRIK1P39086 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GRIK1P39086 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIK1P39086 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.33■□□□□ 0.53
GRIK1P39086 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIK1P39086 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GRIK1P39086 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIK1P39086 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GRIK1P39086 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
GRIK1P39086 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.33■□□□□ 0.53
GRIK1P39086 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIK1P39086 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GRIK1P39086 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GRIK1P39086 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
GRIK1P39086 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.33■□□□□ 0.52
GRIK1P39086 ELK2BP-201ENST00000415014 1224 ntBASIC18.33■□□□□ 0.52
GRIK1P39086 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
GRIK1P39086 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms