Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT20P35900 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT20P35900 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT20P35900 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT20P35900 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT20P35900 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
KRT20P35900 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 AL121761.2-201ENST00000598007 1648 ntBASIC16.6■□□□□ 0.25
KRT20P35900 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
KRT20P35900 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT20P35900 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT20P35900 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT20P35900 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT20P35900 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT20P35900 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT20P35900 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT20P35900 KRT18P55-202ENST00000578578 1546 ntBASIC16.6■□□□□ 0.25
KRT20P35900 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
KRT20P35900 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT20P35900 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
KRT20P35900 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
KRT20P35900 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
KRT20P35900 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
KRT20P35900 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT20P35900 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT20P35900 VENTXP7-201ENST00000475503 772 ntBASIC16.59■□□□□ 0.25
KRT20P35900 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT20P35900 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
KRT20P35900 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT20P35900 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT20P35900 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT20P35900 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
KRT20P35900 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT20P35900 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT20P35900 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT20P35900 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.58■□□□□ 0.25
KRT20P35900 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT20P35900 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT20P35900 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.58■□□□□ 0.25
KRT20P35900 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
KRT20P35900 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT20P35900 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms