Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 AL645929.1-201ENST00000420084 975 ntBASIC19.07■□□□□ 0.64
KRT9P35527 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 RNF126P1-202ENST00000569893 925 ntBASIC19.07■□□□□ 0.64
KRT9P35527 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 AL390719.2-201ENST00000606993 987 ntBASIC19.07■□□□□ 0.64
KRT9P35527 AL139327.4-201ENST00000612362 153 ntBASIC19.07■□□□□ 0.64
KRT9P35527 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.07■□□□□ 0.64
KRT9P35527 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.07■□□□□ 0.64
KRT9P35527 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.07■□□□□ 0.64
KRT9P35527 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 FLJ38576-201ENST00000623820 2459 ntBASIC19.06■□□□□ 0.64
KRT9P35527 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KRT9P35527 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KRT9P35527 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT9P35527 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.06■□□□□ 0.64
KRT9P35527 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT9P35527 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT9P35527 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT9P35527 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KRT9P35527 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT9P35527 AC018695.7-201ENST00000624587 2492 ntBASIC19.06■□□□□ 0.64
KRT9P35527 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT9P35527 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 PCDHB19P-201ENST00000570871 2371 ntBASIC19.05■□□□□ 0.64
KRT9P35527 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
KRT9P35527 AC046185.3-201ENST00000623228 1824 ntBASIC19.05■□□□□ 0.64
KRT9P35527 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRT9P35527 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
KRT9P35527 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT9P35527 NTF6B-201ENST00000591913 560 ntBASIC19.05■□□□□ 0.64
KRT9P35527 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT9P35527 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms