Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-FP30511 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HLA-FP30511 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-FP30511 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-FP30511 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-FP30511 AC002347.1-201ENST00000569543 541 ntBASIC17.63■□□□□ 0.41
HLA-FP30511 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-FP30511 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-FP30511 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HLA-FP30511 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-FP30511 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-FP30511 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HLA-FP30511 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-FP30511 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-FP30511 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 AC134043.2-201ENST00000624206 2238 ntBASIC17.62■□□□□ 0.41
HLA-FP30511 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HLA-FP30511 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.62■□□□□ 0.41
HLA-FP30511 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-FP30511 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 AC018845.2-201ENST00000568326 409 ntBASIC17.62■□□□□ 0.41
HLA-FP30511 AC010327.4-202ENST00000591484 748 ntBASIC17.62■□□□□ 0.41
HLA-FP30511 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.62■□□□□ 0.41
HLA-FP30511 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-FP30511 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HLA-FP30511 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-FP30511 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 UPF3AP3-201ENST00000420996 769 ntBASIC17.61■□□□□ 0.41
HLA-FP30511 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 GPX1P2-201ENST00000429271 606 ntBASIC17.61■□□□□ 0.41
HLA-FP30511 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.61■□□□□ 0.41
HLA-FP30511 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.61■□□□□ 0.41
HLA-FP30511 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HLA-FP30511 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.61■□□□□ 0.41
HLA-FP30511 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HLA-FP30511 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HLA-FP30511 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-FP30511 RPSAP43-201ENST00000402237 625 ntBASIC17.6■□□□□ 0.41
HLA-FP30511 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-FP30511 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.6■□□□□ 0.41
HLA-FP30511 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms