Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 AL009178.2-201ENST00000597278 2719 ntBASIC13.38□□□□□ -0.27
RAB4AP20338 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.38□□□□□ -0.27
RAB4AP20338 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB4AP20338 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.38□□□□□ -0.27
RAB4AP20338 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB4AP20338 AC105036.2-201ENST00000569468 176 ntBASIC13.38□□□□□ -0.27
RAB4AP20338 AL121832.2-201ENST00000610979 668 ntBASIC13.38□□□□□ -0.27
RAB4AP20338 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.38□□□□□ -0.27
RAB4AP20338 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RAB4AP20338 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAB4AP20338 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RAB4AP20338 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RAB4AP20338 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RAB4AP20338 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 AL138688.1-201ENST00000624851 1594 ntBASIC13.37□□□□□ -0.27
RAB4AP20338 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 OR2I1P-210ENST00000642037 4691 ntBASIC13.37□□□□□ -0.27
RAB4AP20338 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 DUSP5P2-201ENST00000426873 1033 ntBASIC13.37□□□□□ -0.27
RAB4AP20338 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB4AP20338 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 AF201337.1-201ENST00000520239 748 ntBASIC13.37□□□□□ -0.27
RAB4AP20338 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB4AP20338 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
RAB4AP20338 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RAB4AP20338 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB4AP20338 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RAB4AP20338 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB4AP20338 AC092368.3-202ENST00000574180 1591 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms