Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NFKB1P19838 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NFKB1P19838 AC003669.1-201ENST00000334569 611 ntBASIC17.72■□□□□ 0.43
NFKB1P19838 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.72■□□□□ 0.43
NFKB1P19838 HCG4P8-203ENST00000443049 980 ntBASIC17.72■□□□□ 0.43
NFKB1P19838 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.72■□□□□ 0.43
NFKB1P19838 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.72■□□□□ 0.43
NFKB1P19838 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.72■□□□□ 0.43
NFKB1P19838 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NFKB1P19838 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NFKB1P19838 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.71■□□□□ 0.43
NFKB1P19838 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
NFKB1P19838 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.71■□□□□ 0.43
NFKB1P19838 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.71■□□□□ 0.43
NFKB1P19838 MIR5100-201ENST00000579544 119 ntBASIC17.71■□□□□ 0.43
NFKB1P19838 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.71■□□□□ 0.43
NFKB1P19838 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.71■□□□□ 0.43
NFKB1P19838 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.71■□□□□ 0.43
NFKB1P19838 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NFKB1P19838 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NFKB1P19838 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NFKB1P19838 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NFKB1P19838 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NFKB1P19838 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NFKB1P19838 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 PMPCAP1-201ENST00000508114 1576 ntBASIC17.7■□□□□ 0.42
NFKB1P19838 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NFKB1P19838 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NFKB1P19838 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NFKB1P19838 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NFKB1P19838 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NFKB1P19838 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.7■□□□□ 0.42
NFKB1P19838 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.7■□□□□ 0.42
NFKB1P19838 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.7■□□□□ 0.42
NFKB1P19838 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NFKB1P19838 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NFKB1P19838 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.7■□□□□ 0.42
NFKB1P19838 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NFKB1P19838 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NFKB1P19838 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NFKB1P19838 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NFKB1P19838 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
NFKB1P19838 AC093525.9-201ENST00000624961 1746 ntBASIC17.69■□□□□ 0.42
NFKB1P19838 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.69■□□□□ 0.42
NFKB1P19838 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 AC022211.2-201ENST00000585075 2527 ntBASIC17.69■□□□□ 0.42
NFKB1P19838 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NFKB1P19838 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms