Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LINC00628-201ENST00000628516 1289 ntBASIC19.24■□□□□ 0.67
SMPD1P17405 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
SMPD1P17405 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.23■□□□□ 0.67
SMPD1P17405 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SMPD1P17405 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SMPD1P17405 LYSMD4-203ENST00000378904 2122 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.23■□□□□ 0.67
SMPD1P17405 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 AL671277.1-201ENST00000429656 993 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.23■□□□□ 0.67
SMPD1P17405 AC140658.5-201ENST00000438532 169 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 KRT8P48-201ENST00000515599 1220 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 AC026120.1-201ENST00000611536 926 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMPD1P17405 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.23■□□□□ 0.67
SMPD1P17405 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SMPD1P17405 BICD1-207ENST00000551848 1962 ntBASIC19.23■□□□□ 0.67
SMPD1P17405 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.22■□□□□ 0.67
SMPD1P17405 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.22■□□□□ 0.67
SMPD1P17405 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.22■□□□□ 0.67
SMPD1P17405 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
SMPD1P17405 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMPD1P17405 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
SMPD1P17405 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.22■□□□□ 0.67
SMPD1P17405 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.22■□□□□ 0.67
SMPD1P17405 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 AL627223.1-201ENST00000416693 442 ntBASIC19.22■□□□□ 0.67
SMPD1P17405 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SMPD1P17405 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SMPD1P17405 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
SMPD1P17405 AC025678.2-201ENST00000562061 970 ntBASIC19.22■□□□□ 0.67
SMPD1P17405 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 AL645728.2-201ENST00000641974 660 ntBASIC19.22■□□□□ 0.67
SMPD1P17405 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMPD1P17405 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.21■□□□□ 0.67
SMPD1P17405 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SMPD1P17405 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMPD1P17405 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.21■□□□□ 0.67
SMPD1P17405 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
SMPD1P17405 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.21■□□□□ 0.67
SMPD1P17405 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMPD1P17405 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.66
SMPD1P17405 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
SMPD1P17405 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMPD1P17405 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms