Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.09■□□□□ 0.49
H2AFXP16104 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.09■□□□□ 0.49
H2AFXP16104 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
H2AFXP16104 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
H2AFXP16104 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.08■□□□□ 0.49
H2AFXP16104 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.08■□□□□ 0.49
H2AFXP16104 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.08■□□□□ 0.49
H2AFXP16104 AL391256.1-201ENST00000443260 1855 ntBASIC18.08■□□□□ 0.49
H2AFXP16104 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
H2AFXP16104 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H2AFXP16104 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2AFXP16104 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
H2AFXP16104 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
H2AFXP16104 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
H2AFXP16104 RPS2P4-201ENST00000476944 856 ntBASIC18.08■□□□□ 0.48
H2AFXP16104 AC026271.3-201ENST00000571884 352 ntBASIC18.08■□□□□ 0.48
H2AFXP16104 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.08■□□□□ 0.48
H2AFXP16104 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2AFXP16104 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H2AFXP16104 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2AFXP16104 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
H2AFXP16104 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.08■□□□□ 0.48
H2AFXP16104 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.08■□□□□ 0.48
H2AFXP16104 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H2AFXP16104 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
H2AFXP16104 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
H2AFXP16104 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.07■□□□□ 0.48
H2AFXP16104 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
H2AFXP16104 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
H2AFXP16104 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.07■□□□□ 0.48
H2AFXP16104 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.07■□□□□ 0.48
H2AFXP16104 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
H2AFXP16104 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H2AFXP16104 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
H2AFXP16104 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.06■□□□□ 0.48
H2AFXP16104 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.06■□□□□ 0.48
H2AFXP16104 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.06■□□□□ 0.48
H2AFXP16104 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2AFXP16104 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
H2AFXP16104 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2AFXP16104 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
H2AFXP16104 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 AL355355.2-201ENST00000442321 338 ntBASIC18.06■□□□□ 0.48
H2AFXP16104 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.06■□□□□ 0.48
H2AFXP16104 MTDHP1-201ENST00000605323 784 ntBASIC18.06■□□□□ 0.48
H2AFXP16104 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
H2AFXP16104 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H2AFXP16104 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms