Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.03■□□□□ 0.96
COL11A2P13942 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL11A2P13942 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
COL11A2P13942 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL11A2P13942 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
COL11A2P13942 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A2P13942 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A2P13942 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A2P13942 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.02■□□□□ 0.96
COL11A2P13942 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COL11A2P13942 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 SLC25A1P3-201ENST00000395415 828 ntBASIC21.02■□□□□ 0.96
COL11A2P13942 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A2P13942 AC241585.1-201ENST00000433527 519 ntBASIC21.02■□□□□ 0.96
COL11A2P13942 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.02■□□□□ 0.96
COL11A2P13942 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.02■□□□□ 0.96
COL11A2P13942 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.02■□□□□ 0.96
COL11A2P13942 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL11A2P13942 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.02■□□□□ 0.96
COL11A2P13942 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A2P13942 FOXO1B-201ENST00000504678 1527 ntBASIC21.02■□□□□ 0.96
COL11A2P13942 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.02■□□□□ 0.95
COL11A2P13942 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A2P13942 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
COL11A2P13942 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.02■□□□□ 0.95
COL11A2P13942 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A2P13942 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A2P13942 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 AC016027.1-202ENST00000607927 1699 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.01■□□□□ 0.95
COL11A2P13942 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.01■□□□□ 0.95
COL11A2P13942 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.01■□□□□ 0.95
COL11A2P13942 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COL11A2P13942 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.01■□□□□ 0.95
COL11A2P13942 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A2P13942 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 AC012569.1-201ENST00000591191 1524 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL11A2P13942 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 LYSMD4-203ENST00000378904 2122 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.01■□□□□ 0.95
COL11A2P13942 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.01■□□□□ 0.95
COL11A2P13942 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.01■□□□□ 0.95
COL11A2P13942 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A2P13942 AC027307.2-201ENST00000591252 911 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 AC073592.8-201ENST00000624126 511 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 AC008267.7-201ENST00000624570 1194 ntBASIC21.01■□□□□ 0.95
COL11A2P13942 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A2P13942 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
COL11A2P13942 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COL11A2P13942 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21■□□□□ 0.95
COL11A2P13942 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 AC022144.1-201ENST00000602255 1580 ntBASIC21■□□□□ 0.95
COL11A2P13942 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A2P13942 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL11A2P13942 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms