Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.21□□□□□ -0.13
DEFA4P12838 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA4P12838 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA4P12838 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.21□□□□□ -0.13
DEFA4P12838 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA4P12838 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.2□□□□□ -0.14
DEFA4P12838 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
DEFA4P12838 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 DUTP2-201ENST00000519164 463 ntBASIC14.2□□□□□ -0.14
DEFA4P12838 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
DEFA4P12838 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.2□□□□□ -0.14
DEFA4P12838 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 AL136038.4-201ENST00000603606 1261 ntBASIC14.2□□□□□ -0.14
DEFA4P12838 LINC01023-201ENST00000606054 436 ntBASIC14.2□□□□□ -0.14
DEFA4P12838 AC139887.4-201ENST00000607877 719 ntBASIC14.2□□□□□ -0.14
DEFA4P12838 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA4P12838 AC097493.4-201ENST00000641197 219 ntBASIC14.2□□□□□ -0.14
DEFA4P12838 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DEFA4P12838 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA4P12838 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DEFA4P12838 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 AC063926.3-201ENST00000624734 5658 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 TERF1P1-201ENST00000311003 1181 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.19□□□□□ -0.14
DEFA4P12838 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
DEFA4P12838 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 KRT18P48-201ENST00000434763 852 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.19□□□□□ -0.14
DEFA4P12838 AC092647.4-201ENST00000457211 535 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.19□□□□□ -0.14
DEFA4P12838 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.19□□□□□ -0.14
DEFA4P12838 AL441883.1-201ENST00000566170 1045 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 AC011558.1-201ENST00000623459 338 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 AC100803.2-201ENST00000562459 1963 ntBASIC14.19□□□□□ -0.14
DEFA4P12838 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA4P12838 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA4P12838 PCDHB19P-201ENST00000570871 2371 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms