Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.45■□□□□ 0.22
CTSBP07858 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSBP07858 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.45■□□□□ 0.22
CTSBP07858 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSBP07858 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSBP07858 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSBP07858 AC027601.4-201ENST00000611259 610 ntBASIC16.45■□□□□ 0.22
CTSBP07858 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 GPR89P-201ENST00000407924 1495 ntBASIC16.45■□□□□ 0.22
CTSBP07858 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSBP07858 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 ACTG1P4-201ENST00000425123 1122 ntBASIC16.44■□□□□ 0.22
CTSBP07858 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.44■□□□□ 0.22
CTSBP07858 AC008667.4-201ENST00000607370 168 ntBASIC16.44■□□□□ 0.22
CTSBP07858 LINC00896-202ENST00000609602 2128 ntBASIC16.44■□□□□ 0.22
CTSBP07858 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.44■□□□□ 0.22
CTSBP07858 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTSBP07858 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTSBP07858 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSBP07858 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSBP07858 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTSBP07858 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 KRT18P3-201ENST00000451602 1288 ntBASIC16.43■□□□□ 0.22
CTSBP07858 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.43■□□□□ 0.22
CTSBP07858 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.43■□□□□ 0.22
CTSBP07858 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.43■□□□□ 0.22
CTSBP07858 OR7E47P-204ENST00000575924 449 ntBASIC16.43■□□□□ 0.22
CTSBP07858 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.43■□□□□ 0.22
CTSBP07858 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 AL805961.1-202ENST00000641562 540 ntBASIC16.43■□□□□ 0.22
CTSBP07858 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 PMS2P7-201ENST00000506558 1336 ntBASIC16.43■□□□□ 0.22
CTSBP07858 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
CTSBP07858 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTSBP07858 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTSBP07858 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
CTSBP07858 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTSBP07858 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTSBP07858 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTSBP07858 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms