Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMNAP02545 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LMNAP02545 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 TP73-AS1-210ENST00000637775 1455 ntBASIC18.22■□□□□ 0.51
LMNAP02545 AC008556.1-201ENST00000610908 2040 ntBASIC18.22■□□□□ 0.51
LMNAP02545 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 MIR770-201ENST00000390219 98 ntBASIC18.22■□□□□ 0.51
LMNAP02545 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LMNAP02545 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LMNAP02545 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMNAP02545 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LMNAP02545 AD000864.1-201ENST00000624076 2295 ntBASIC18.21■□□□□ 0.51
LMNAP02545 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LMNAP02545 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.21■□□□□ 0.51
LMNAP02545 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.21■□□□□ 0.51
LMNAP02545 AC007967.2-201ENST00000432613 625 ntBASIC18.21■□□□□ 0.51
LMNAP02545 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.21■□□□□ 0.51
LMNAP02545 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
LMNAP02545 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.21■□□□□ 0.51
LMNAP02545 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.21■□□□□ 0.51
LMNAP02545 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 AC012640.2-201ENST00000561606 901 ntBASIC18.21■□□□□ 0.51
LMNAP02545 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMNAP02545 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
LMNAP02545 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.21■□□□□ 0.51
LMNAP02545 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LMNAP02545 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.2■□□□□ 0.5
LMNAP02545 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LMNAP02545 RCC2P3-201ENST00000418112 1537 ntBASIC18.2■□□□□ 0.5
LMNAP02545 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.2■□□□□ 0.5
LMNAP02545 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 UNC93B6-202ENST00000528242 690 ntBASIC18.2■□□□□ 0.5
LMNAP02545 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.2■□□□□ 0.5
LMNAP02545 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.2■□□□□ 0.5
LMNAP02545 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMNAP02545 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LMNAP02545 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMNAP02545 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.19■□□□□ 0.5
LMNAP02545 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMNAP02545 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMNAP02545 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.19■□□□□ 0.5
LMNAP02545 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LMNAP02545 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms