Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.29■□□□□ 0.52
C1RP00736 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
C1RP00736 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
C1RP00736 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 CYMP-203ENST00000474680 1263 ntBASIC18.29■□□□□ 0.52
C1RP00736 CXCL1P1-201ENST00000502804 216 ntBASIC18.29■□□□□ 0.52
C1RP00736 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.29■□□□□ 0.52
C1RP00736 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.29■□□□□ 0.52
C1RP00736 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.29■□□□□ 0.52
C1RP00736 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.29■□□□□ 0.52
C1RP00736 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C1RP00736 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
C1RP00736 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C1RP00736 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.29■□□□□ 0.52
C1RP00736 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 AC100803.2-201ENST00000562459 1963 ntBASIC18.28■□□□□ 0.52
C1RP00736 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
C1RP00736 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.28■□□□□ 0.52
C1RP00736 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 FAM185BP-201ENST00000443595 716 ntBASIC18.28■□□□□ 0.52
C1RP00736 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.28■□□□□ 0.52
C1RP00736 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 AL031432.2-201ENST00000566714 459 ntBASIC18.28■□□□□ 0.52
C1RP00736 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 AL928711.1-201ENST00000570165 459 ntBASIC18.28■□□□□ 0.52
C1RP00736 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.28■□□□□ 0.52
C1RP00736 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.28■□□□□ 0.52
C1RP00736 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.28■□□□□ 0.52
C1RP00736 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.28■□□□□ 0.52
C1RP00736 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.28■□□□□ 0.52
C1RP00736 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C1RP00736 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 AC025580.3-201ENST00000617932 1424 ntBASIC18.27■□□□□ 0.52
C1RP00736 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
C1RP00736 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.27■□□□□ 0.52
C1RP00736 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.27■□□□□ 0.52
C1RP00736 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.27■□□□□ 0.52
C1RP00736 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.27■□□□□ 0.52
C1RP00736 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C1RP00736 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C1RP00736 FLJ13224-201ENST00000313737 1514 ntBASIC18.27■□□□□ 0.51
C1RP00736 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C1RP00736 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C1RP00736 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
C1RP00736 AL121761.2-201ENST00000598007 1648 ntBASIC18.27■□□□□ 0.51
C1RP00736 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
C1RP00736 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C1RP00736 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
C1RP00736 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C1RP00736 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C1RP00736 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C1RP00736 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C1RP00736 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C1RP00736 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms