Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR4453-201ENST00000584019 89 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 TSSK5P-201ENST00000423978 907 ntBASIC19.68■□□□□ 0.74
ALDH1A1P00352 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ALDH1A1P00352 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALDH1A1P00352 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AC012569.1-201ENST00000591191 1524 ntBASIC19.67■□□□□ 0.74
ALDH1A1P00352 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALDH1A1P00352 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.67■□□□□ 0.74
ALDH1A1P00352 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 TP53TG3HP-202ENST00000569755 579 ntBASIC19.66■□□□□ 0.74
ALDH1A1P00352 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.66■□□□□ 0.74
ALDH1A1P00352 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALDH1A1P00352 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALDH1A1P00352 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ALDH1A1P00352 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms