Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE6O95741 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE6O95741 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 AC122714.2-201ENST00000502787 707 ntBASIC17.11■□□□□ 0.33
CPNE6O95741 IGHV3-22-201ENST00000520721 359 ntBASIC17.11■□□□□ 0.33
CPNE6O95741 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE6O95741 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.11■□□□□ 0.33
CPNE6O95741 AC145285.3-201ENST00000564603 959 ntBASIC17.11■□□□□ 0.33
CPNE6O95741 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.11■□□□□ 0.33
CPNE6O95741 AC008735.5-201ENST00000623544 497 ntBASIC17.11■□□□□ 0.33
CPNE6O95741 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
CPNE6O95741 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE6O95741 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE6O95741 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE6O95741 AC092910.1-201ENST00000482027 1129 ntBASIC17.1■□□□□ 0.33
CPNE6O95741 DUTP2-201ENST00000519164 463 ntBASIC17.1■□□□□ 0.33
CPNE6O95741 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.1■□□□□ 0.33
CPNE6O95741 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE6O95741 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE6O95741 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
CPNE6O95741 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CPNE6O95741 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CPNE6O95741 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPNE6O95741 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE6O95741 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE6O95741 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE6O95741 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CPNE6O95741 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CPNE6O95741 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 MIR940-201ENST00000401276 94 ntBASIC17.09■□□□□ 0.33
CPNE6O95741 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE6O95741 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE6O95741 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE6O95741 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE6O95741 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE6O95741 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.09■□□□□ 0.33
CPNE6O95741 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
CPNE6O95741 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE6O95741 AC104109.2-201ENST00000602919 1418 ntBASIC17.09■□□□□ 0.33
CPNE6O95741 AC010460.3-201ENST00000511359 1579 ntBASIC17.09■□□□□ 0.33
CPNE6O95741 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE6O95741 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE6O95741 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE6O95741 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms