Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCA5LO95447 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCA5LO95447 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LCA5LO95447 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.49■□□□□ 0.55
LCA5LO95447 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCA5LO95447 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCA5LO95447 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LCA5LO95447 AL135999.2-201ENST00000622438 1686 ntBASIC18.48■□□□□ 0.55
LCA5LO95447 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.48■□□□□ 0.55
LCA5LO95447 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LCA5LO95447 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.48■□□□□ 0.55
LCA5LO95447 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.48■□□□□ 0.55
LCA5LO95447 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.48■□□□□ 0.55
LCA5LO95447 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.48■□□□□ 0.55
LCA5LO95447 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 AC111152.3-201ENST00000569699 673 ntBASIC18.48■□□□□ 0.55
LCA5LO95447 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.48■□□□□ 0.55
LCA5LO95447 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LCA5LO95447 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LCA5LO95447 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.48■□□□□ 0.55
LCA5LO95447 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.48■□□□□ 0.55
LCA5LO95447 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCA5LO95447 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LCA5LO95447 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCA5LO95447 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LCA5LO95447 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 RCN1P1-201ENST00000400413 996 ntBASIC18.47■□□□□ 0.55
LCA5LO95447 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 GUSBP12-201ENST00000513727 720 ntBASIC18.47■□□□□ 0.55
LCA5LO95447 AC083849.1-201ENST00000615227 514 ntBASIC18.47■□□□□ 0.55
LCA5LO95447 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.47■□□□□ 0.55
LCA5LO95447 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
LCA5LO95447 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCA5LO95447 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 AC026691.1-201ENST00000602502 2017 ntBASIC18.46■□□□□ 0.55
LCA5LO95447 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LCA5LO95447 FAM220CP-201ENST00000395253 831 ntBASIC18.46■□□□□ 0.55
LCA5LO95447 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 AC006011.2-201ENST00000621313 1158 ntBASIC18.46■□□□□ 0.55
LCA5LO95447 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LCA5LO95447 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.46■□□□□ 0.55
LCA5LO95447 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCA5LO95447 AC009336.1-201ENST00000608941 1553 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms