Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.86■□□□□ 0.13
CLPXO76031 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CLPXO76031 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.86■□□□□ 0.13
CLPXO76031 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.86■□□□□ 0.13
CLPXO76031 AL445675.2-201ENST00000620291 557 ntBASIC15.86■□□□□ 0.13
CLPXO76031 AC113410.3-201ENST00000623366 203 ntBASIC15.86■□□□□ 0.13
CLPXO76031 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLPXO76031 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLPXO76031 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLPXO76031 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CLPXO76031 KSR1P1-201ENST00000446298 240 ntBASIC15.85■□□□□ 0.13
CLPXO76031 AF186192.3-201ENST00000583427 947 ntBASIC15.85■□□□□ 0.13
CLPXO76031 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CLPXO76031 GPAT2P1-201ENST00000444924 1672 ntBASIC15.85■□□□□ 0.13
CLPXO76031 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLPXO76031 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.85■□□□□ 0.13
CLPXO76031 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLPXO76031 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLPXO76031 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLPXO76031 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLPXO76031 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.84■□□□□ 0.13
CLPXO76031 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 AL365203.3-201ENST00000609742 2057 ntBASIC15.84■□□□□ 0.13
CLPXO76031 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.84■□□□□ 0.13
CLPXO76031 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.84■□□□□ 0.13
CLPXO76031 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLPXO76031 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.84■□□□□ 0.13
CLPXO76031 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.84■□□□□ 0.13
CLPXO76031 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
CLPXO76031 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.84■□□□□ 0.13
CLPXO76031 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms