Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 AC092667.1-201ENST00000434301 2586 ntBASIC16.74■□□□□ 0.27
GFRA3O60609 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 WASH6P-202ENST00000359512 1437 ntBASIC16.74■□□□□ 0.27
GFRA3O60609 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.74■□□□□ 0.27
GFRA3O60609 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.74■□□□□ 0.27
GFRA3O60609 TMEM14DP-201ENST00000422205 345 ntBASIC16.74■□□□□ 0.27
GFRA3O60609 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.74■□□□□ 0.27
GFRA3O60609 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GFRA3O60609 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.74■□□□□ 0.27
GFRA3O60609 AC007967.4-201ENST00000614700 386 ntBASIC16.74■□□□□ 0.27
GFRA3O60609 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
GFRA3O60609 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.74■□□□□ 0.27
GFRA3O60609 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.74■□□□□ 0.27
GFRA3O60609 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
GFRA3O60609 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 GABARAPL3-202ENST00000624044 1851 ntBASIC16.73■□□□□ 0.27
GFRA3O60609 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.73■□□□□ 0.27
GFRA3O60609 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GFRA3O60609 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 AC093004.1-201ENST00000508850 424 ntBASIC16.73■□□□□ 0.27
GFRA3O60609 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
GFRA3O60609 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 AL023806.1-201ENST00000603994 1649 ntBASIC16.73■□□□□ 0.27
GFRA3O60609 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.73■□□□□ 0.27
GFRA3O60609 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GFRA3O60609 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GFRA3O60609 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GFRA3O60609 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.72■□□□□ 0.27
GFRA3O60609 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GFRA3O60609 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 AL583810.1-201ENST00000553344 1045 ntBASIC16.72■□□□□ 0.27
GFRA3O60609 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.72■□□□□ 0.27
GFRA3O60609 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GFRA3O60609 AL844908.2-201ENST00000609461 460 ntBASIC16.72■□□□□ 0.27
GFRA3O60609 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms