Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KRT8P47-201ENST00000604727 1398 ntBASIC17.28■□□□□ 0.36
PCDHGA12O60330 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 COX5BP2-201ENST00000392354 334 ntBASIC17.27■□□□□ 0.36
PCDHGA12O60330 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 KRT18P2-201ENST00000447938 1258 ntBASIC17.27■□□□□ 0.36
PCDHGA12O60330 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 AC004706.3-202ENST00000621574 984 ntBASIC17.27■□□□□ 0.36
PCDHGA12O60330 AC073592.5-201ENST00000624854 528 ntBASIC17.27■□□□□ 0.36
PCDHGA12O60330 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGA12O60330 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGA12O60330 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGA12O60330 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGA12O60330 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA12O60330 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 AL020989.1-201ENST00000422979 469 ntBASIC17.26■□□□□ 0.35
PCDHGA12O60330 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA12O60330 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA12O60330 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 KRT18P28-201ENST00000453838 1332 ntBASIC17.25■□□□□ 0.35
PCDHGA12O60330 AC022898.2-201ENST00000616822 1312 ntBASIC17.25■□□□□ 0.35
PCDHGA12O60330 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 CRYGEP-201ENST00000412192 528 ntBASIC17.25■□□□□ 0.35
PCDHGA12O60330 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 LINC02084-201ENST00000606069 1096 ntBASIC17.25■□□□□ 0.35
PCDHGA12O60330 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 AC012313.1-201ENST00000593393 3059 ntBASIC17.25■□□□□ 0.35
PCDHGA12O60330 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA12O60330 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms