Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC233702.3-201ENST00000578656 1387 ntBASIC16.65■□□□□ 0.26
PCDH7O60245 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDH7O60245 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDH7O60245 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDH7O60245 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDH7O60245 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH7O60245 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH7O60245 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH7O60245 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDH7O60245 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH7O60245 KRT8P10-201ENST00000450021 1447 ntBASIC16.64■□□□□ 0.25
PCDH7O60245 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDH7O60245 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH7O60245 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH7O60245 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH7O60245 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH7O60245 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 AP002383.4-201ENST00000442518 975 ntBASIC16.64■□□□□ 0.25
PCDH7O60245 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDH7O60245 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH7O60245 TPSP2-201ENST00000561760 610 ntBASIC16.64■□□□□ 0.25
PCDH7O60245 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH7O60245 AP002414.4-201ENST00000589764 1148 ntBASIC16.64■□□□□ 0.25
PCDH7O60245 Z69720.1-201ENST00000601483 472 ntBASIC16.64■□□□□ 0.25
PCDH7O60245 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH7O60245 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH7O60245 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PCDH7O60245 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH7O60245 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH7O60245 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH7O60245 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH7O60245 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 AL121761.2-201ENST00000598007 1648 ntBASIC16.63■□□□□ 0.25
PCDH7O60245 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH7O60245 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH7O60245 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 DRAXINP1-201ENST00000437611 948 ntBASIC16.63■□□□□ 0.25
PCDH7O60245 TOB2P1-201ENST00000469761 992 ntBASIC16.63■□□□□ 0.25
PCDH7O60245 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH7O60245 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH7O60245 AC011467.2-201ENST00000598425 242 ntBASIC16.63■□□□□ 0.25
PCDH7O60245 AP000550.4-202ENST00000639755 178 ntBASIC16.63■□□□□ 0.25
PCDH7O60245 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms