Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.25□□□□□ -0.13
SSSCA1O60232 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SSSCA1O60232 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.25□□□□□ -0.13
SSSCA1O60232 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SSSCA1O60232 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSSCA1O60232 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 AL391005.1-201ENST00000623953 2435 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.24□□□□□ -0.13
SSSCA1O60232 KRT8P47-201ENST00000604727 1398 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 PCDHB17P-201ENST00000539533 2393 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 HYMAI-201ENST00000635591 3347 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSSCA1O60232 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSSCA1O60232 KRT18P29-201ENST00000397031 1267 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 AL355355.2-201ENST00000442321 338 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.24□□□□□ -0.13
SSSCA1O60232 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.24□□□□□ -0.13
SSSCA1O60232 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.24□□□□□ -0.13
SSSCA1O60232 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSSCA1O60232 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.24□□□□□ -0.13
SSSCA1O60232 LINC01311-201ENST00000565162 1445 ntBASIC14.24□□□□□ -0.13
SSSCA1O60232 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.24□□□□□ -0.13
SSSCA1O60232 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSSCA1O60232 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSSCA1O60232 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 RPPH1-201ENST00000516869 333 ntBASIC14.23□□□□□ -0.13
SSSCA1O60232 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.23□□□□□ -0.13
SSSCA1O60232 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms