Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.65■□□□□ 0.26
DUX1O43812 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.65■□□□□ 0.26
DUX1O43812 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DUX1O43812 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.65■□□□□ 0.26
DUX1O43812 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DUX1O43812 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 AL590787.1-201ENST00000568856 1315 ntBASIC16.65■□□□□ 0.26
DUX1O43812 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DUX1O43812 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.65■□□□□ 0.26
DUX1O43812 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX1O43812 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.65■□□□□ 0.26
DUX1O43812 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.65■□□□□ 0.26
DUX1O43812 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
DUX1O43812 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
DUX1O43812 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
DUX1O43812 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX1O43812 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DUX1O43812 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 HMGN1P19-201ENST00000436976 333 ntBASIC16.64■□□□□ 0.25
DUX1O43812 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX1O43812 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX1O43812 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX1O43812 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX1O43812 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX1O43812 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX1O43812 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
DUX1O43812 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 AL354751.1-201ENST00000412768 1863 ntBASIC16.63■□□□□ 0.25
DUX1O43812 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX1O43812 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DUX1O43812 IGLL3P-201ENST00000412472 434 ntBASIC16.63■□□□□ 0.25
DUX1O43812 PMS2P2-201ENST00000425039 1128 ntBASIC16.63■□□□□ 0.25
DUX1O43812 SLC25A6P5-201ENST00000435663 894 ntBASIC16.63■□□□□ 0.25
DUX1O43812 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
DUX1O43812 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.63■□□□□ 0.25
DUX1O43812 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX1O43812 AC010507.1-201ENST00000633895 436 ntBASIC16.63■□□□□ 0.25
DUX1O43812 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX1O43812 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DUX1O43812 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DUX1O43812 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX1O43812 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
DUX1O43812 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.62■□□□□ 0.25
DUX1O43812 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DUX1O43812 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX1O43812 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
DUX1O43812 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DUX1O43812 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX1O43812 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms