Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.56■□□□□ 0.4
SMAD6O43541 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SMAD6O43541 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
SMAD6O43541 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SMAD6O43541 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SMAD6O43541 FZD10-202ENST00000539839 3282 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 ZNF259P1-201ENST00000407656 1365 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SMAD6O43541 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 AL590787.1-201ENST00000568856 1315 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.55■□□□□ 0.4
SMAD6O43541 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 MIR940-201ENST00000401276 94 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SMAD6O43541 PGM5P2-202ENST00000637225 1043 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.55■□□□□ 0.4
SMAD6O43541 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.55■□□□□ 0.4
SMAD6O43541 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
SMAD6O43541 GPR89P-201ENST00000407924 1495 ntBASIC17.55■□□□□ 0.4
SMAD6O43541 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMAD6O43541 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 AC026471.1-201ENST00000564629 3026 ntBASIC17.54■□□□□ 0.4
SMAD6O43541 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.54■□□□□ 0.4
SMAD6O43541 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.54■□□□□ 0.4
SMAD6O43541 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 POLD2P1-201ENST00000511220 997 ntBASIC17.54■□□□□ 0.4
SMAD6O43541 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 LINC00896-202ENST00000609602 2128 ntBASIC17.54■□□□□ 0.4
SMAD6O43541 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.54■□□□□ 0.4
SMAD6O43541 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMAD6O43541 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
SMAD6O43541 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
SMAD6O43541 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMAD6O43541 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.53■□□□□ 0.4
SMAD6O43541 PMS2P1-201ENST00000431037 1228 ntBASIC17.53■□□□□ 0.4
SMAD6O43541 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMAD6O43541 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms